We have had a lot of activity in recent months on the OpenTox project with regards to developing a linked data and resource infrastructure for the support of interdisciplinary predictive toxicology research and safety assessment. I enclose several links below including our recent overview workshop presentation in Potsdam, reports, demonstrations, technical links and interest groups. A paper will be published as an Open Access publication in coming weeks (reference below).
We welcome your joining this community and movement to work towards the common goal of safer products and a safer environment, supported by new alternative and advanced methods.
Barry
Predictive Toxicology Workshop in Oxford (2-6 August 2010)
Strategies: http://barryhardy.blogs.com/theferryman/2010/05/developing-new-predictive-toxicology-strategies.html
Strategies: http://barryhardy.blogs.com/theferryman/2010/05/developing-new-predictive-toxicology-strategies.html
Program (eCheminfo website): http://echeminfo.com/COMTY_oxfordadmet10
Registration: http://echem2010-admet.eventsbot.com/
OpenTox Links
Your Resources
If you have a useful resource you would like to see integrated into OpenTox, e.g., a database from your project to which an OpenTox web service could be added, please contact me to discuss.
If you have a useful resource you would like to see integrated into OpenTox, e.g., a database from your project to which an OpenTox web service could be added, please contact me to discuss.
OpenTox Workshop in Potsdam, 30 May 2010
Program:
http://www.opentox.org/data/blogentries/public/opentoxworkshoppotsdam2010
Program:
http://www.opentox.org/data/blogentries/public/opentoxworkshoppotsdam2010
OpenTox Presentation:
http://www.opentox.org/home/documents/presentations/opentoxpresPotsdam30May2010/view
http://www.opentox.org/home/documents/presentations/opentoxpresPotsdam30May2010/view
OpenTox Reports
http://www.opentox.org/home/documents/Reports
http://www.opentox.org/home/documents/Reports
OpenTox Demos
(Please keep in mind these are early prototype applications and may not have features you want. We welcome requests from you for what you additionally need in these applications or others.)
http://www.opentox.org/toxicity-prediction
(Please keep in mind these are early prototype applications and may not have features you want. We welcome requests from you for what you additionally need in these applications or others.)
http://www.opentox.org/toxicity-prediction
OpenTox Signup & Mailing List
Complete the form at http://www.opentox.org/join_form
Complete the form at http://www.opentox.org/join_form
Note: If you have a general interest and want to receive a monthly news update e.g., on new applications, data resources, ontology developments, news etc., select the "I'm interested in OpenTox news"
option. We also welcome including news from other projects in the newsletter. Do not select the option "I'm interested in OpenTox Technical Development" unless you are doing technical computing work
in the field as this list is quite technical and busy!
OpenTox Collaboration Pool
If you are interested in joining virtual organisation collaborations in predictive toxicology supported by OpenTox, complete the form linked from:
http://www.opentox.org/data/blogentries/public/opentoxcollaborationpool
If you are interested in joining virtual organisation collaborations in predictive toxicology supported by OpenTox, complete the form linked from:
http://www.opentox.org/data/blogentries/public/opentoxcollaborationpool
Technical Development Details including API
http://www.opentox.org/dev
http://www.opentox.org/dev
Publication Reference
Collaborative Development of Predictive Toxicology Applications, B. Hardy, N. Douglas, C. Helma, M. Rautenberg, N. Jeliazkova, V. Jeliazkov, I. Nikolova, R. Benigni, O. Tcheremenskaia, S. Kramer, T. Girschick, F. Buchwald, J. Wicker, A. Karwath, M. Gütlein, A. Maunz, H. Sarimveis, G. Melagraki, A. Afantitis, P. Sopasakis, D. Gallagher, V. Poroikov, D. Filimonov, A. Zakharov, A. Lagunin, T. Gloriozova, S. Novikov, N. Skvortsova, D. Druzhilovsky , S. Chawla, I. Ghosh, S. Ray, H. Patel, S. Escher, accepted 3 June 2010 for Open Access publication in J. Chemical Informatics http://www.jcheminf.com/ (2010).
Collaborative Development of Predictive Toxicology Applications, B. Hardy, N. Douglas, C. Helma, M. Rautenberg, N. Jeliazkova, V. Jeliazkov, I. Nikolova, R. Benigni, O. Tcheremenskaia, S. Kramer, T. Girschick, F. Buchwald, J. Wicker, A. Karwath, M. Gütlein, A. Maunz, H. Sarimveis, G. Melagraki, A. Afantitis, P. Sopasakis, D. Gallagher, V. Poroikov, D. Filimonov, A. Zakharov, A. Lagunin, T. Gloriozova, S. Novikov, N. Skvortsova, D. Druzhilovsky , S. Chawla, I. Ghosh, S. Ray, H. Patel, S. Escher, accepted 3 June 2010 for Open Access publication in J. Chemical Informatics http://www.jcheminf.com/ (2010).
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